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Sirius 1.2

An Extensible Molecular Graphics and Analysis Environment



Sirius 1.2 facilities

Vendor`s Webhttp://
The Regents of the University of California webshot
OSWindows XP, Windows Vista, Windows 7, Mac OS, Linux
Limitationsnot specified
Actualizedmore than year ago
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Sirius manufacturer description

Sirius 1.2 is a component-based visualization framework designed for application in molecular modeling, drug discovery, protein structure analysis, as well as database mining and sequence-based work. It is equally suited for protein and small molecule construction and visualization.The primary features include:

  • full support for structure building from fragments and peptide editor

  • graphical front-end for Modeller

  • distance- and geometry-based addition of hydrogens and detection of hydrogen bonds and steric clashes

  • command line interface and scripting compatible with RasMol

  • visualization of molecular dynamics trajectories with support for multi-file simulations, real-time secondary structure and RMSD calculations and export of trajectories as video

  • protein structure alignment

  • independent manipulation of displayed structures

  • support for PDB, MOL2, SDF and other formats

  • export of photorealistic graphics using bundled POV-Ray

  • access to PDB, InterPro and Uniprot databases with interactive features

  • highly capable sequence alignment editor

  • export/import of the current display

  • cross-viewer connectivity for common selection and coloring

In addition to the desktop application, the 3D visualization component has been adapted to serve as a Web component for plugging into Web pages, either static or generated dynamically from back-end databases. Contact us for file distribution to use the applet version of Sirius Miscellaneous with your project.
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Free download Sirius 1.2
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Sirius categories

drug discovery, Sirius, molecular modeling

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